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1

High-resolution mapping of copy-number alterations with massively parallel sequencing

Chiang, Derek Y, Getz, Gad, Jaffe, David B, O'Kelly, Michael J T, Zhao, Xiaojun, Carter, Scott L, Russ, Carsten, Nusbaum, Chad, Meyerson, Matthew, Lander, Eric S

Journal:

Year:

2008

Language:

english

File:

PDF, 2.20 MB

english, 2008

2

A novel isoform ratio switch of the polypyrimidine tract binding protein

Eric J. Wagner, Russ P. Carstens, Mariano A. Garcia-Blanco

Journal:

ELECTROPHORESIS

Year:

1999

Language:

english

File:

PDF, 157 KB

english, 1999

3

Solution hybrid selection with ultra-long oligonucleotides for massively parallel targeted sequencing

Gnirke, Andreas, Melnikov, Alexandre, Maguire, Jared, Rogov, Peter, LeProust, Emily M, Brockman, William, Fennell, Timothy, Giannoukos, Georgia, Fisher, Sheila, Russ, Carsten

Journal:

Nature Biotechnology

Year:

2009

Language:

english

File:

PDF, 763 KB

english, 2009

4

Aggressive triple negative breast cancers have unique molecular signature on the basis of mitochondrial genetic and functional defects

Guha, Manti, Srinivasan, Satish, Raman, Pichai, Jiang, Yuefu, Kaufman, Brett A., Taylor, Deanne, Dong, Dawei, Chakrabarti, Rumela, Picard, Martin, Carstens, Russ P., Kijima, Yuko, Feldman, Mike, Avadh

Journal:

Biochimica et Biophysica Acta (BBA) - Molecular Basis of Disease

Year:

2018

Language:

english

File:

PDF, 3.50 MB

english, 2018

5

Cleft lip and cleft palate in Esrp1 knockout mice is associated with alterations in epithelial-mesenchymal crosstalk

Lee, SungKyoung, Sears, Matthew J., Zhang, Zijun, Li, Hong, Salhab, Imad, Krebs, Philippe, Xing, Yi, Nah, Hyun-Duck, Williams, Trevor, Carstens, Russ P.

Journal:

Development (The Company of Biologists)

Year:

2020

File:

PDF, 2.12 MB

2020

6

Systematic screening of the 14-3-3 eta (η) chain gene for polymorphic variants and case-control analysis in schizophrenia

Rachel Bell, Janet Munro, Carsten Russ, John F. Powell, Anne Bruinvels, Robert W. Kerwin, David A. Collier

Journal:

American Journal of Medical Genetics Part A

Year:

2000

Language:

english

File:

PDF, 111 KB

english, 2000

7

Increase in the relative expression of tau with four microtubule binding repeat regions in frontotemporal lobar degeneration and progressive supranuclear palsy brains

Martin Ingelsson, Karunya Ramasamy, Carsten Russ, Stefanie H. Freeman, Jennifer Orne, Susan Raju, Toshifumi Matsui, John H. Growdon, Matthew P. Frosch, Bernardino Ghetti, Robert H. Brown, Michael C. I

Journal:

Acta Neuropathologica

Year:

2007

Language:

english

File:

PDF, 411 KB

english, 2007

8

Key considerations for measuring allelic expression on a genomic scale using high-throughput sequencing

PIERRE FONTANILLAS, CHRISTIAN R. LANDRY, PATRICIA J. WITTKOPP, CARSTEN RUSS, JONATHAN D. GRUBER, CHAD NUSBAUM, DANIEL L. HARTL

Journal:

Molecular Ecology

Year:

2010

Language:

english

File:

PDF, 597 KB

english, 2010

9

10.1038/5009

Kehoe, Patrick G., Russ, Carsten, McIlroy, Stephen, Williams, Hywel, Holmans, Peter, Holmes, Clive, Liolitsa, Danae, Vahidassr, Djamil, Powell, John, McGleenon, Bronagh, Liddell, Malcolm, Plomin, Robe

Journal:

Nature Genetics

Year:

1999

Language:

english

File:

PDF, 82 KB

english, 1999

10

An ESRP-regulated splicing programme is abrogated during the epithelial–mesenchymal transition

Warzecha, Claude C, Jiang, Peng, Amirikian, Karine, Dittmar, Kimberly A, Lu, Hezhe, Shen, Shihao, Guo, Wei, Xing, Yi, Carstens, Russ P

Journal:

The EMBO Journal

Year:

2010

Language:

english

File:

PDF, 1.85 MB

english, 2010

11

ANG mutations segregate with familial and 'sporadic' amyotrophic lateral sclerosis

Greenway, Matthew J, Andersen, Peter M, Russ, Carsten, Ennis, Sean, Cashman, Susan, Donaghy, Colette, Patterson, Victor, Swingler, Robert, Kieran, Dairin, Prehn, Jochen

Journal:

Nature Genetics

Year:

2006

Language:

english

File:

PDF, 195 KB

english, 2006

12

An optimized protocol for protein purification in cultured mammalian cells using a tandem affinity purification approach

Tsai, Arthur, Carstens, Russ P

Journal:

Nature Protocols

Year:

2007

Language:

english

File:

PDF, 252 KB

english, 2007

13

Alternative splicing of fibroblast growth factor receptor 2 (FGF-R2) in human prostate cancer

Carstens, Russ P, Eaton, James V, Krigman, Hannah R, Walther, Philip J, Garcia-Blanco, Mariano A

Journal:

Year:

1997

Language:

english

File:

PDF, 749 KB

english, 1997

14

A Cellular Memory of Developmental History Generates Phenotypic Diversity in C. elegans

Sarah E. Hall, Matthew Beverly, Carsten Russ, Chad Nusbaum, Piali Sengupta

Journal:

Current Biology

Year:

2010

Language:

english

File:

PDF, 695 KB

english, 2010

15

ESRP1 and ESRP2 Are Epithelial Cell-Type-Specific Regulators of FGFR2 Splicing

Claude C. Warzecha, Trey K. Sato, Behnam Nabet, John B. Hogenesch, Russ P. Carstens

Journal:

Year:

2009

Language:

english

File:

PDF, 1.01 MB

english, 2009

16

Variants in candidate ALS modifier genes linked to Cu/Zn superoxide dismutase do not explain divergent survival phenotypes

Wendy J. Broom, Carsten Russ, Peter C. Sapp, Diane McKenna-Yasek, Betsy A. Hosler, Peter M. Andersen, Robert H. Brown Jr.

Journal:

Neuroscience Letters

Year:

2006

Language:

english

File:

PDF, 121 KB

english, 2006

17

Association analysis of the glycogen synthase kinase-3β gene in bipolar disorder

Naoki Nishiguchi, Gerome Breen, Carsten Russ, David St Clair, David Collier

Journal:

Neuroscience Letters

Year:

2006

Language:

english

File:

PDF, 63 KB

english, 2006

18

Erratum to “Variants in candidate ALS modifier genes linked to Cu/Zn superoxide dismutase do not explain divergent survival phenotypes” [Neurosci. Lett. 392 (2006) 52–57]

Wendy J. Broom, Carsten Russ, Peter C. Sapp, Diane McKenna-Yasek, Betsy A. Hosler, Peter M. Andersen, Robert H. Brown Jr.

Journal:

Neuroscience Letters

Year:

2006

Language:

english

File:

PDF, 49 KB

english, 2006

19

DNA sequence analysis of the conserved region around the SOD1 gene locus in recessively inherited ALS

Wendy J. Broom, Daniel V. Johnson, Manuel Garber, Peter M. Andersen, Niall Lennon, John Landers, Chad Nusbaum, Carsten Russ, Robert H. Brown Jr.

Journal:

Neuroscience Letters

Year:

2009

Language:

english

File:

PDF, 223 KB

english, 2009

20

Two methods for improved purification of full-length mammalian proteins that have poor expression and/or solubility using standard Escherichia coli procedures

Jinming Geng, Russ P. Carstens

Journal:

Protein Expression and Purification

Year:

2006

Language:

english

File:

PDF, 846 KB

english, 2006

21

APOE genotype, vascular risk and cognitive impairment in an African Caribbean population

Robert Stewart, Carsten Russ, Marcus Richards, Carol Brayne, Simon Lovestone, Anthony Mann

Journal:

Neurobiology of Aging

Year:

2000

Language:

english

File:

PDF, 195 KB

english, 2000

22

The extended haplotype of the microtubule associated protein tau gene is not associated with Pick's disease

Carsten Russ, Simon Lovestone, Matt Baker, Stuart M Pickering-Brown, Peter M Andersen, Rob Furlong, David Mann, John F Powell

Journal:

Neuroscience Letters

Year:

2001

Language:

english

File:

PDF, 75 KB

english, 2001

23

The microtubule associated protein Tau gene and Alzheimer's disease – an association study and meta-analysis

Carsten Russ, John F Powell, Jinghua Zhao, Matt Baker, Mike Hutton, Fiona Crawford, Mike Mullan, Gerwin Roks, Marc Cruts, Simon Lovestone

Journal:

Neuroscience Letters

Year:

2001

Language:

english

File:

PDF, 81 KB

english, 2001

24

Apolipoprotein E: Depressive illness, depressive symptoms, and Alzheimer's disease

Clive Holmes, Carsten Russ, George Kirov, Katherine J. Aitchison, John F. Powell, David A. Collier, Simon Lovestone

Journal:

Biological Psychiatry

Year:

1998

Language:

english

File:

PDF, 571 KB

english, 1998

25

CYP2D6 polymorphisms in Alzheimer’s disease, with and without extrapyramidal signs, showing no apolipoprotein E ε4 effect modification

Jorge A Cervilla, Carsten Russ, Clive Holmes, Katherine Aitchison, C.A.Dale Smith, John Powell, Simon Lovestone

Journal:

Biological Psychiatry

Year:

1999

Language:

english

File:

PDF, 30 KB

english, 1999

26

Genome-wide identification and characterization of replication origins by deep sequencing

Jia Xu, Yoshimi Yanagisawa, Alexander M Tsankov, Christopher Hart, Keita Aoki, Naveen Kommajosyula, Kathleen E Steinmann, James Bochicchio, Carsten Russ, Aviv Regev, Oliver J Rando, Chad Nusbaum, Hiro

Journal:

Year:

2012

Language:

english

File:

PDF, 1.78 MB

english, 2012

27

Functional effects of a tandem duplication polymorphism in the 5′flanking region of the DRD4 gene

Ursula M. D’Souza, Carsten Russ, Eda Tahir, Jonathan Mill, Peter McGuffin, Philip J. Asherson, Ian W. Craig

Journal:

Biological Psychiatry

Year:

2004

Language:

english

File:

PDF, 223 KB

english, 2004

28

Dissociating effort and success in speech comprehension: an fMRI study

Anne Lise Giraud, Christian Kell, Rainer Klinke, Michael O. Russ, Philipp Sterzer, Carsten Thierfelder, Christine Preibisch, Andreas Kleinschmidt

Journal:

Year:

2001

Language:

english

File:

PDF, 67 KB

english, 2001

29

Pacific biosciences sequencing technology for genotyping and variation discovery in human data

Carneiro, Mauricio O, Russ, Carsten, Ross, Michael G, Gabriel, Stacey B, Nusbaum, Chad, DePristo, Mark A

Journal:

Year:

2012

Language:

english

File:

PDF, 318 KB

english, 2012

30

Complex changes in alternative pre-mRNA splicing play a central role in the epithelial-to-mesenchymal transition (EMT)

Warzecha, Claude C., Carstens, Russ P.

Journal:

Seminars in Cancer Biology

Year:

2012

Language:

english

File:

PDF, 941 KB

english, 2012

31

De novo somatic mutations in components of the PI3K-AKT3-mTOR pathway cause hemimegalencephaly

Lee, Jeong Ho, Huynh, My, Silhavy, Jennifer L, Kim, Sangwoo, Dixon-Salazar, Tracy, Heiberg, Andrew, Scott, Eric, Bafna, Vineet, Hill, Kiley J, Collazo, Adrienne, Funari, Vincent, Russ, Carsten, Gabrie

Journal:

Nature Genetics

Year:

2012

Language:

english

File:

PDF, 898 KB

english, 2012

32

Evaluation of the Golgi trafficking protein VPS54 ( wobbler ) as a candidate for ALS

Meisler, Miriam H., Russ, Carsten, Montgomery, Kate T., Greenway, Matthew, Ennis, Sean, Hardiman, Orla, Figlewicz, Denise A., Quenneville, Nicole R., Conibear, Elizabeth, Brown, Robert H.

Journal:

Amyotrophic Lateral Sclerosis

Year:

2008

Language:

english

File:

PDF, 301 KB

english, 2008

33

Characterizing and measuring bias in sequence data

Michael G Ross, Carsten Russ, Maura Costello, Andrew Hollinger…

Journal:

Year:

2013

Language:

english

File:

PDF, 503 KB

english, 2013

34

Semiconductor-based DNA sequencing of histone modification states

Cheng, Christine S., Rai, Kunal, Garber, Manuel, Hollinger, Andrew, Robbins, Dana, Anderson, Scott, Macbeth, Alyssa, Tzou, Austin, Carneiro, Mauricio O., Raychowdhury, Raktima, Russ, Carsten, Hacohen,

Journal:

Nature Communications

Year:

2013

Language:

english

File:

PDF, 997 KB

english, 2013

35

Exo70 Isoform Switching upon Epithelial-Mesenchymal Transition Mediates Cancer Cell Invasion

Lu, Hezhe, Liu, Jianglan, Liu, Shujing, Zeng, Jingwen, Ding, Deqiang, Carstens, Russ P., Cong, Yusheng, Xu, Xiaowei, Guo, Wei

Journal:

Developmental Cell

Year:

2013

Language:

english

File:

PDF, 3.77 MB

english, 2013

36

Genes Related to Vascular Disease (APOE, VLDL-R, DCP-1) and Other Vascular Factors in Late-Life Depression

Cervilla, Jorge, Prince, Martin, Joels, Suzanne, Russ, Carsten, Lovestone, Simon

Journal:

American Journal of Geriatric Psychiatry

Year:

2004

Language:

english

File:

PDF, 111 KB

english, 2004

37

Networking in an Alternative Splicing World

Carstens, Russ P.

Journal:

Year:

2014

Language:

english

File:

PDF, 200 KB

english, 2014

38

Comprehensive variation discovery in single human genomes

Weisenfeld, Neil I, Yin, Shuangye, Sharpe, Ted, Lau, Bayo, Hegarty, Ryan, Holmes, Laurie, Sogoloff, Brian, Tabbaa, Diana, Williams, Louise, Russ, Carsten, Nusbaum, Chad, Lander, Eric S, MacCallum, Iai

Journal:

Nature Genetics

Year:

2014

Language:

english

File:

PDF, 388 KB

english, 2014

39

50bp deletion in the promoter for superoxide dismutase 1 (SOD1) reduces SOD1 expression in vitro and may correlate with increased age of onset of sporadic amyotrophic lateral sclerosis

Broom, Wendy J., Greenway, Matthew, Sadri-Vakili, Ghazaleh, Russ, Carsten, Auwarter, Kristen E., Glajch, Kelly E., Dupre, Nicolas, Swingler, Robert J., Purcell, Shaun, Hayward, Caroline, Sapp, Peter C

Journal:

Amyotrophic Lateral Sclerosis

Year:

2008

Language:

english

File:

PDF, 348 KB

english, 2008

40

Functional roles of alternative splicing factors in human disease

Cieply, Benjamin, Carstens, Russ P.

Journal:

Wiley Interdisciplinary Reviews: RNA

Year:

2015

Language:

english

File:

PDF, 1.01 MB

english, 2015

41

Mitochondrial genome sequences reveal evolutionary relationships of thePhytophthora1c clade species

Lassiter, Erica S., Russ, Carsten, Nusbaum, Chad, Zeng, Qiandong, Saville, Amanda C., Olarte, Rodrigo A., Carbone, Ignazio, Hu, Chia-Hui, Seguin-Orlando, Andaine, Samaniego, Jose A., Thorne, Jeffrey L

Journal:

Current Genetics

Year:

2015

Language:

english

File:

PDF, 784 KB

english, 2015

42

No association of DYNC1H1 with sporadic ALS in a case‐control study of a northern European derived population: A tagging SNP approach

Shah, Paresh R., Ahmad‐Annuar, Azlina, Ahmadi, Kourosh R., Russ, Carsten, Sapp, Peter C., Robert Horvitz, H., Brown, Robert H., Goldstein, David B., Fisher, Elizabeth M. C.

Journal:

Amyotrophic Lateral Sclerosis

Year:

2006

Language:

english

File:

PDF, 566 KB

english, 2006

43

ESRP2 controls an adult splicing programme in hepatocytes to support postnatal liver maturation

Bhate, Amruta, Parker, Darren J., Bebee, Thomas W., Ahn, Jaegyoon, Arif, Waqar, Rashan, Edrees H., Chorghade, Sandip, Chau, Anthony, Lee, Jae-Hyung, Anakk, Sayeepriyadarshini, Carstens, Russ P., Xiao,

Journal:

Nature Communications

Year:

2015

Language:

english

File:

PDF, 2.60 MB

english, 2015

44

Apolipoprotein E Genotype, Vascular Risk and Early Cognitive Impairment in an African Caribbean Population

Stewart, Robert, Russ, Carsten, Richards, Marcus, Brayne, Carol, Lovestone, Simon, Mann, Anthony

Journal:

Dementia and Geriatric Cognitive Disorders

Year:

2001

Language:

english

File:

PDF, 138 KB

english, 2001

45

The epithelial splicing factors ESRP1 and ESRP2 positively and negatively regulate diverse types of alternative splicing events

Warzecha, Claude C., Shen, Shihao, Xing, Yi, Carstens, Russ P.

Journal:

Year:

2009

Language:

english

File:

PDF, 2.91 MB

english, 2009

46

Multiphasic and Dynamic Changes in Alternative Splicing during Induction of Pluripotency Are Coordinated by Numerous RNA-Binding Proteins

Cieply, Benjamin, Park, Juw Won, Nakauka-Ddamba, Angela, Bebee, Thomas W., Guo, Yang, Shang, Xuequn, Lengner, Christopher J., Xing, Yi, Carstens, Russ P.

Journal:

Year:

2016

Language:

english

File:

PDF, 2.33 MB

english, 2016

47

Determination of a comprehensive alternative splicing regulatory network and the combinatorial regulation by key factors during the epithelial to mesenchymal transition

Yang, Yueqin, Park, Juw Won, Bebee, Thomas W., Warzecha, Claude C., Guo, Yang, Shang, Xuequn, Xing, Yi, Carstens, Russ P.

Journal:

Molecular and Cellular Biology

Year:

2016

Language:

english

File:

PDF, 7.98 MB

english, 2016

48

Tankyrase inhibitor sensitizes lung cancer cells to EGFR inhibition via stabilizing angiomotins and inhibiting YAP signaling

Wang, Hui, Lu, Bo, Castillo, Johnny, Zhang, Yue, Yang, Zinger, McAllister, Gregory, Lindeman, Alicia, Reece-Hoyes, John, Tallarico, John, Russ, Carsten, Hoffman, Greg, Xu, Wenqing, Schirle, Markus, Co

Journal:

Journal of Biological Chemistry

Year:

2016

Language:

english

File:

PDF, 4.99 MB

english, 2016

49

A Familial Form of Pallidoluysionigral Degeneration and Amyotrophic Lateral Sclerosis With Divergent Clinical Presentations

Portera-Cailliau, Carlos, Russ, Carsten, Brown, Robert H., Budson, Andrew E., Vonsattel, Jean-Paul, Folkerth, Rebecca D., Corbo, Joseph C.

Journal:

Journal of Neuropathology and Experimental Neurology

Year:

2007

Language:

english

File:

PDF, 929 KB

english, 2007

50

An Intronic Sequence Element Mediates Both Activation and Repression of Rat Fibroblast Growth Factor Receptor 2 Pre-mRNA Splicing

Carstens, Russ P., McKeehan, Wallace L., Garcia-Blanco, Mariano A.

Journal:

Molecular and Cellular Biology

Year:

1998

Language:

english

File:

PDF, 1.30 MB

english, 1998

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